THREaD Mapper Studio

Make public option will make your dataset accessible to the worldwide users
Chekout the turorial screencast before getting started if not the documentation
If you encounter an Internal Error, Please use FireFox under XP, if the error still persists, send the Error Code and the name of the Browser
More documentation updates coming soon !
tested on IE6, IE7, FireFox on WinXP, also tested with Google chrome on Fedora and WinXP. May Work on safari Mac. Please note IE8 is currently not supported

News Feed: THREaD Mapper Studio

	Alex Kozik's  http://www.atgc.org/ and Madmapper inspiring us to create further visualizations tools/methods for genetic mapping
	Matplotlib http://matplotlib.sourceforge.net/
	Networkx http://networkx.lanl.gov/index.html
	Numpy  http://numpy.scipy.org/
	Python PathRecon  Module by  Magwene  http://biology.duke.edu/magwenelab/ (Bioinformatics 19(7):842-850)
	Python http://www.python.org/
	Python Imaging Library (PIL) http://www.pythonware.com/products/pil/
	Scipy http://www.scipy.org/
	opus https://trondheim.cs.washington.edu/svn/opus/tags/4.2.1/opus_core/plot_functions.py
	Silk Icons, the high quality icons are from SILK ICONS  http://www.famfamfam.com/lab/icons/silk/
	ExtJS version 2.4 http://extjs.com and our sincere thanks to forum http://www.extjs.com/forum/ and many members on the mailing list there (We should be soon upgrading to the newer version)
	Jmol and a big thanks to Jmol users mailing list:[ http://jmol.sourceforge.net/ ]
	Future version will have the pure-python implementation of LPC http://www.maths.dur.ac.uk/~dma0je/lpc/Software%20Jochen%20Einbeck.htm(Please see the references there in)
	Web2py (http://www.web2py.com/) platform on which this server is running. Version 1.65.5  by Massimo Di Pierro and various members on the forum
	http://groups.google.com/group/web2py
	http://groups.google.com/group/web2py/browse_thread/thread/6746ef364e7f4717/1de9c4ab4faa9c9f?lnk=gst&q=Jitender#1de9c4ab4faa9c9f
	Antmap's Java code and help  manual has been  a lot of help and it really helped us to make provide you with Two-point distances and segregation distortion
    modules http://cse.naro.affrc.go.jp/iwatah/antmap/index.html and the
    Iwata H, Ninomiya S (2006) AntMap: constructing genetic linkage maps using an ant colony optimization algorithm. Breeding Science,Vol. 56 (2006) , No. 4 371-37756: 371-377
    MstMap C++ source code and the sample dataset from the source http://wheat.pw.usda.gov/ggpages/maps/OWB/

THREaD Mapper Studio

Now Mapping can be even more fun !

Main Menu

Please note: users will not be able (without request) to change or delete an uploaded genotype dataset after the 'make public' checkbox has been activated.

List of Dataset Deposited on the server

News Feed: THREaD Mapper Studio

Credits and Acknowledgements

Rush your suggestions, comments and Bug reports